ammawla

encode-toolkit

Name: ammawla/encode-toolkit
Author: ammawla

MCP server and Claude Plugin for a full ENCODE Project genomic data and analysis toolkit — search, download, track, and analyze functional genomics experiments

MCP Servers5 stars3 forks● PythonAGPL-3.0Updated 8d ago

ClaudeWave Trust Score

87/100

✓ Trusted

Passed

✓Open-source license (AGPL-3.0)
✓Actively maintained (<30d)
✓Clear description
✓Topics declared

Last scanned: 4/14/2026

Install in Claude Desktop

Method detected: Manual

{
  "mcpServers": {
    "encode-toolkit": {
      "command": "node",
      "args": ["/path/to/encode-toolkit/dist/index.js"]
    }
  }
}

1. Copy the snippet above.

2. Paste into ~/Library/Application Support/Claude/claude_desktop_config.json (Mac) or %APPDATA%\Claude\claude_desktop_config.json (Windows).

3. Replace any <placeholder> values with your API keys or paths.

4. Restart Claude Desktop. The MCP server appears automatically.

💡 Clone https://github.com/ammawla/encode-toolkit and follow its README for install instructions.

About

MCP Servers overview

README preview not available. Visit the repo on GitHub for full documentation.

Topics

aiai-agentsai-biobioinformaticsbioinformatics-toolclaudeclaude-codeclaude-code-mcpclaude-code-pluginclaude-code-skillsclaude-mcpclaude-pluginclaude-skillsencodemcp-server

Frequently asked

What people ask about encode-toolkit

What is ammawla/encode-toolkit?

ammawla/encode-toolkit is mcp servers for the Claude AI ecosystem. MCP server and Claude Plugin for a full ENCODE Project genomic data and analysis toolkit — search, download, track, and analyze functional genomics experiments It has 5 GitHub stars and was last updated 8d ago.

How do I install encode-toolkit?

You can install encode-toolkit by cloning the repository (https://github.com/ammawla/encode-toolkit) or following the README instructions on GitHub. ClaudeWave also provides quick install blocks on this page.

Is ammawla/encode-toolkit safe to use?

Our security agent has analyzed ammawla/encode-toolkit and assigned a Trust Score of 87/100 (tier: Trusted). See the full breakdown of passed checks and flags on this page.

Who maintains ammawla/encode-toolkit?

ammawla/encode-toolkit is maintained by ammawla. The last recorded GitHub activity is from 8d ago, with 1 open issues.

Are there alternatives to encode-toolkit?

Yes. On ClaudeWave you can browse similar mcp servers at /categories/mcp, sorted by popularity or recent activity.

1-click deploy

Deploy encode-toolkit to your cloud

Ship this repo to production in minutes. Each platform spins up its own environment with editable env vars.

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Markdown (README)

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